PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0464.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 408aa    MW: 44475.7 Da    PI: 9.2047
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0464.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.7e-05169191223
                          EETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                          +C++Cg+ F+ ++ L+ H  + H
  Kaladp0048s0464.1.p 169 SCHKCGEKFTKWEALEAHHLSrH 191
                          8*****************99877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280168191IPR007087Zinc finger, C2H2
SuperFamilySSF563991.73E-22193406No hitNo description
Gene3DG3DSA:3.90.228.102.3E-12202404IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MPTTPWLSSI KKSLQCKTDP LDVHDPKART THLRAIATKR PSTKSGCSRT ISNLRDVIHG  60
SKRHVEKPVS CSPRSIQSSE FLNPIAHEVI LSGSGCELKI SGYGGDQDHH KDQNSTNGGA  120
TVGKSVSRRQ NLFELVKAGG DADTGSRIGP KSNRRRPAEM RLDENGGCSC HKCGEKFTKW  180
EALEAHHLSR HAVTELVEGD SSRKIVEIIC RTSWLKSEDS CGRIEKIFKI HNMSKTLAQF  240
EEYRELIKAN ASKLPKKHPR CLADGNELLR FHGTTVACSL GQNGCTTLCV SDKCSICRII  300
RNGFSIKKEL NGGIGVFTAS TSGRALQSVE KAEGDNSEES SVRKALVICR VIAGRVHKPL  360
ENIQDIAGQS GFDSLAGKGA DLSSNMEDLY LLNRKALLPC FVIICKS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010267823.11e-178PREDICTED: uncharacterized protein LOC104604941
RefseqXP_010267824.11e-178PREDICTED: uncharacterized protein LOC104604941
RefseqXP_010267825.11e-178PREDICTED: uncharacterized protein LOC104604941
TrEMBLA0A151SFE51e-180A0A151SFE5_CAJCA; Uncharacterized protein
STRINGPOPTR_0001s44130.11e-176(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-153C2H2 family protein